Basic Information
Locus ID:
gene-QYE76_015101
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
NB-ARC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 226033815 | 226055186 | - | gene-QYE76_015101 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.18 | 148,196.94 Da | 40.56 | 106.75 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 197 | 314 | 9.76767E-4 | - |
| Pfam | PF00931 | NB-ARC domain | 175 | 417 | 4.2E-38 | IPR002182 |
| Pfam | PF18052 | Rx N-terminal domain | 13 | 88 | 8.5E-17 | IPR041118 |
| Pfam | PF00560 | Leucine Rich Repeat | 758 | 780 | 0.26 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 856 | 878 | 0.47 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 492 | 835 | 7.31E-53 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 162 | 430 | 1.75E-54 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 744 | 1105 | 5.1E-32 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 1110 | 1306 | 1.59E-23 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 156 | 322 | 8.9E-33 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 528 | 620 | 1.6E-8 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1116 | 1314 | 1.5E-29 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 329 | 415 | 4.2E-7 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 724 | 930 | 7.5E-40 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 940 | 1101 | 7.1E-8 | IPR032675 |
| Gene3D | G3DSA:1.10.10.10 | - | 416 | 503 | 4.4E-10 | IPR036388 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 621 | 723 | 4.1E-23 | IPR032675 |
| Gene3D | G3DSA:1.20.5.4130 | - | 13 | 121 | 9.6E-15 | - |
| SMART | SM00367 | LRR_CC_2 | 854 | 881 | 190.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 1257 | 1284 | 460.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 756 | 776 | 270.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 681 | 708 | 10.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 657 | 680 | 280.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 1136 | 1163 | 450.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 780 | 807 | 15.0 | IPR006553 |
| PRINTS | PR00364 | Disease resistance protein signature | 267 | 281 | 2.6E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 194 | 209 | 2.6E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 778 | 794 | 2.6E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 364 | 378 | 2.6E-18 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14470.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_047043947.1 | disease resistance protein RGA2-like [Lolium rigidum] | 0 |
| Q7XA42 | Putative disease resistance protein RGA1 OS=Solanum bulbocastanum OX=147425 GN=RGA1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B5Z592 | Disease resistance protein RGA3 OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology