Basic Information
Locus ID:
gene-QYE76_015091
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
NB-ARC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 225827366 | 225833956 | - | gene-QYE76_015091 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 148,407.59 Da | 39.91 | 104.75 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 197 | 314 | 0.0040316 | - |
| Pfam | PF00931 | NB-ARC domain | 174 | 417 | 1.7E-38 | IPR002182 |
| Pfam | PF18052 | Rx N-terminal domain | 13 | 89 | 8.5E-17 | IPR041118 |
| Pfam | PF00560 | Leucine Rich Repeat | 856 | 877 | 0.36 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 758 | 780 | 0.42 | IPR001611 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 162 | 430 | 1.15E-54 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 1111 | 1297 | 2.45E-23 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 744 | 1083 | 5.1E-33 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 492 | 833 | 1.36E-52 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 156 | 322 | 2.0E-32 | IPR027417 |
| Gene3D | G3DSA:1.20.5.4130 | - | 12 | 121 | 3.1E-14 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 852 | 1094 | 4.1E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 535 | 849 | 5.6E-62 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1131 | 1313 | 5.8E-33 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 329 | 415 | 1.2E-6 | IPR042197 |
| Gene3D | G3DSA:1.10.10.10 | - | 416 | 503 | 2.7E-10 | IPR036388 |
| SMART | SM00367 | LRR_CC_2 | 756 | 776 | 240.0 | IPR006553 |
| SMART | SM00369 | LRR_typ_2 | 854 | 877 | 0.0024 | IPR003591 |
| SMART | SM00367 | LRR_CC_2 | 1257 | 1284 | 250.0 | IPR006553 |
| SMART | SM00369 | LRR_typ_2 | 681 | 705 | 220.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1160 | 1183 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 804 | 827 | 12.0 | IPR003591 |
| SMART | SM00367 | LRR_CC_2 | 780 | 807 | 42.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 657 | 680 | 330.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 681 | 708 | 10.0 | IPR006553 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 565 | 586 | 7.32692 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 856 | 877 | 8.096991 | IPR001611 |
| PRINTS | PR00364 | Disease resistance protein signature | 778 | 794 | 1.0E-17 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 194 | 209 | 1.0E-17 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 267 | 281 | 1.0E-17 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 364 | 378 | 1.0E-17 | - |
| Coils | Coil | Coil | 38 | 58 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G59780.2 | - | 0 |
| RefSeq | XP_051210631.1 | putative disease resistance protein RGA3 [Lolium perenne] | 0 |
| Q7XA42 | Putative disease resistance protein RGA1 OS=Solanum bulbocastanum OX=147425 GN=RGA1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6A3H2 | P-loop containing nucleoside triphosphate hydrolase, leucine-rich repeat domain, L OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology