Basic Information
Locus ID:
gene-QYE76_015021
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Transposase family tnp2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 223859797 | 223865710 | + | gene-QYE76_015021 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.27 | 77,909.67 Da | 63.10 | 75.18 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13952 | Domain of unknown function (DUF4216) | 446 | 507 | 2.3E-14 | IPR025312 |
| Pfam | PF02992 | Transposase family tnp2 | 218 | 320 | 2.0E-52 | IPR004242 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 638 | 672 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 657 | 672 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051202323.1 | uncharacterized protein LOC127315924 [Lolium perenne] | 0 |
| TrEMBL | A0A8R7QJN3 | Transpos_assoc domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | AH01.2693, CH05.4449 |
| Poaceae | Lolium multiflorum | 24 | gene-QYE76_004977, gene-QYE76_006303, gene-QYE76_006527 ... |