Basic Information
Locus ID:
gene-QYE76_014919
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
transposition, RNA-mediated
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 221211217 | 221216772 | + | gene-QYE76_014919 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.96 | 31,884.94 Da | 60.51 | 79.83 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00303 | retropepsin_like | 46 | 113 | 2.52811E-10 | - |
| SUPERFAMILY | SSF50630 | Acid proteases | 46 | 112 | 2.25E-8 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 39 | 125 | 3.6E-10 | IPR021109 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 47 | 58 | - | IPR001969 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 207 | 278 | - | - |
| Coils | Coil | Coil | 293 | 302 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_040382697.1 | uncharacterized protein LOC121055153 [Oryza brachyantha] | 0 |
| TrEMBL | A0A2T7F6G9 | Peptidase A2 domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_1G207500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000027960 |
| Poaceae | Lolium multiflorum | 225 | gene-QYE76_000112, gene-QYE76_000237, gene-QYE76_000651 ... |
| Poaceae | Oryza sativa | 1 | ChrSy.fgenesh.mRNA.19 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr05G009620, Chr05G009630, Chr20G008400 |