Basic Information
Locus ID:
gene-QYE76_014918
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
source UniProtKB
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 221196838 | 221200783 | - | gene-QYE76_014918 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.90 | 68,569.25 Da | 36.95 | 91.35 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00303 | retropepsin_like | 371 | 460 | 1.83209E-13 | - |
| CDD | cd01650 | RT_nLTR_like | 124 | 301 | 1.55641E-38 | - |
| Pfam | PF00078 | Reverse transcriptase (RNA-dependent DNA polymerase) | 131 | 290 | 8.9E-29 | IPR000477 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 67 | 279 | 7.11E-9 | IPR043502 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 348 | 480 | 3.0E-9 | IPR021109 |
| ProSiteProfiles | PS50878 | Reverse transcriptase (RT) catalytic domain profile. | 111 | 371 | 12.954918 | IPR000477 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051201804.1 | uncharacterized protein LOC127315350 [Lolium perenne] | 0 |
| Q03274 | Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Popillia japonica OX=7064 PE=4 SV=1 | 0 | |
| TrEMBL | A0A8I6XP27 | Reverse transcriptase domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 33 | gene-QYE76_000029, gene-QYE76_000961, gene-QYE76_010060 ... |