halophFGD

Basic Information

Locus ID: gene-QYE76_014456

Species & Taxonomic ID: Lolium multiflorum & 4521

Genome Assembly: GCA_030979885.1

Description: Ribosome inactivating protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr1	205342020	205342868	-	gene-QYE76_014456

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.82	31,051.39 Da	40.01	91.31	-0.16

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00161	Ribosome inactivating protein	56	232	2.5E-29	IPR001574
SUPERFAMILY	SSF56371	Ribosome inactivating proteins (RIP)	31	266	2.1E-33	IPR036041
Gene3D	G3DSA:3.40.420.10	Ricin (A subunit), domain 1	22	191	3.6E-24	IPR016138

Gene Ontology

Biological Process:

GO:0017148 (negative regulation of translation)

Molecular Function:

GO:0030598 (rRNA N-glycosylase activity)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_025798193.1	uncharacterized protein LOC112878024 [Panicum hallii]	0
TrEMBL	A0A3L6SAW2	Protein synthesis inhibitor I OS=Panicum miliaceum OX=4540 GN=C2845_PM02G00250 PE=3 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	2	AH01.781, CH01.959
Poaceae	Lolium multiflorum	1	gene-QYE76_014456
Poaceae	Thinopyrum elongatum	1	Tel1E01G452200
Poaceae	Triticum dicoccoides	1	gene_TRIDC1AG041330
Poaceae	Triticum aestivum	2	TraesCS1A02G277900.1.cds1, TraesCS1B02G286800.1.cds1