Basic Information
Locus ID:
gene-QYE76_014313
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Calcium-binding EGF-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 200738963 | 200741931 | + | gene-QYE76_014313 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.22 | 81,410.71 Da | 44.70 | 82.09 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 458 | 719 | 9.0911E-86 | - |
| CDD | cd00054 | EGF_CA | 341 | 382 | 3.78928E-5 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 48 | 89 | 8.4E-9 | IPR025287 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 455 | 716 | 2.2E-44 | IPR001245 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 338 | 390 | 1.21E-5 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 430 | 719 | 6.7E-69 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 436 | 527 | 4.3E-27 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 341 | 391 | 1.6E-10 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 528 | 726 | 4.2E-48 | - |
| SMART | SM00179 | egfca_6 | 341 | 389 | 8.8E-8 | IPR001881 |
| SMART | SM00181 | egf_5 | 299 | 340 | 160.0 | IPR000742 |
| SMART | SM00220 | serkin_6 | 452 | 717 | 7.8E-25 | IPR000719 |
| SMART | SM00181 | egf_5 | 344 | 389 | 0.029 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 452 | 717 | 33.926559 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 571 | 583 | - | IPR008271 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 341 | 373 | - | IPR018097 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 458 | 481 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21250.1 | cell wall-associated kinase. cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component such as oligogalacturonides. | 0 |
| RefSeq | XP_047094310.1 | wall-associated receptor kinase 1-like [Lolium rigidum] | 0 |
| Q39191 | Wall-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=WAK1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6C3X3 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_014311, gene-QYE76_014313 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC2BG030930 |
| Poaceae | Triticum aestivum | 1 | TraesCS2B02G231700.1 |