Basic Information
Locus ID:
gene-QYE76_014259
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 198789773 | 198803650 | + | gene-QYE76_014259 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.91 | 246,689.86 Da | 53.37 | 70.25 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 1152 | 1238 | 2.95404E-27 | - |
| CDD | cd05162 | PWWP | 166 | 252 | 1.14294E-25 | - |
| Pfam | PF00855 | PWWP domain | 1152 | 1239 | 3.6E-18 | IPR000313 |
| Pfam | PF00855 | PWWP domain | 166 | 253 | 9.6E-19 | IPR000313 |
| Pfam | PF14714 | KH-domain-like of EngA bacterial GTPase enzymes, C-terminal | 677 | 735 | 2.2E-6 | IPR032859 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 1148 | 1259 | 5.42E-25 | - |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 164 | 281 | 1.08E-25 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 1147 | 1245 | 2.7E-22 | - |
| Gene3D | G3DSA:3.30.300.20 | - | 676 | 736 | 5.3E-5 | IPR015946 |
| Gene3D | G3DSA:2.30.30.140 | - | 159 | 261 | 4.8E-24 | - |
| SMART | SM00293 | PWWP_4 | 1152 | 1213 | 8.4E-10 | IPR000313 |
| SMART | SM00293 | PWWP_4 | 166 | 227 | 6.8E-9 | IPR000313 |
| SMART | SM00384 | AT_hook_2 | 1376 | 1388 | 0.33 | IPR017956 |
| SMART | SM00384 | AT_hook_2 | 386 | 398 | 4.1 | IPR017956 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 1154 | 1215 | 15.244958 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 168 | 229 | 15.700391 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 991 | 1017 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2151 | 2181 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 376 | 442 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1397 | 1418 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1967 | 2046 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2216 | 2288 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1833 | 1869 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 130 | 152 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1921 | 1935 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2216 | 2265 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2158 | 2181 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 922 | 947 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 135 | 152 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1886 | 1954 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1747 | 1770 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1358 | 1420 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 922 | 937 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1742 | 1770 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2116 | 2139 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1989 | 2026 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02950.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_047044349.1 | PWWP domain-containing protein 3-like [Lolium rigidum] | 0 |
| Q9LYZ0 | PWWP domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=PDP5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0E0L3I8 | PWWP domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology