Basic Information
Locus ID:
gene-QYE76_014244
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Short Name:
CPK13
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 198018510 | 198022755 | + | gene-QYE76_014244 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 60,904.74 Da | 39.20 | 84.87 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 67 | 329 | 2.796E-129 | - |
| Pfam | PF13499 | EF-hand domain pair | 448 | 511 | 6.6E-14 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 376 | 436 | 1.1E-9 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 68 | 330 | 1.0E-71 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 354 | 523 | 2.71E-44 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 66 | 337 | 9.31E-82 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 70 | 153 | 5.5E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 154 | 338 | 4.8E-59 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 339 | 514 | 3.6E-53 | - |
| SMART | SM00054 | efh_1 | 377 | 405 | 1.4E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 485 | 513 | 6.8E-7 | IPR002048 |
| SMART | SM00054 | efh_1 | 449 | 477 | 4.8E-4 | IPR002048 |
| SMART | SM00220 | serkin_6 | 68 | 330 | 1.6E-91 | IPR000719 |
| SMART | SM00054 | efh_1 | 413 | 441 | 1.5 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 481 | 516 | 14.792358 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 373 | 408 | 16.18713 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 68 | 330 | 46.336212 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 445 | 480 | 14.122869 | IPR002048 |
| ProSiteProfiles | PS50042 | cAMP/cGMP binding motif profile. | 76 | 131 | 7.809 | IPR000595 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 188 | 200 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 386 | 398 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 74 | 97 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 494 | 506 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 458 | 470 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 46 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_051205788.1 | calcium-dependent protein kinase 16 [Lolium perenne] | 0 |
| Q6I5I8 | Calcium-dependent protein kinase 16 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK16 PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B5Z1I5 | Calcium-dependent protein kinase 30 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology