Basic Information
Locus ID:
gene-QYE76_014218
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
protein kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 197320274 | 197327079 | + | gene-QYE76_014218 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.54 | 119,362.61 Da | 43.81 | 87.63 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01647 | RT_LTR | 654 | 824 | 1.22732E-55 | - |
| Pfam | PF00078 | Reverse transcriptase (RNA-dependent DNA polymerase) | 693 | 788 | 2.4E-13 | IPR000477 |
| Pfam | PF03732 | Retrotransposon gag protein | 84 | 174 | 5.2E-9 | IPR005162 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 615 | 852 | 2.56E-64 | IPR043502 |
| Gene3D | G3DSA:3.30.70.270 | - | 714 | 790 | 2.9E-45 | IPR043128 |
| Gene3D | G3DSA:3.30.70.270 | - | 794 | 830 | 1.3E-8 | IPR043128 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 365 | 482 | 2.0E-5 | IPR021109 |
| Gene3D | G3DSA:3.10.10.10 | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 617 | 774 | 2.9E-45 | - |
| Coils | Coil | Coil | 926 | 946 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_023521407.1 | LOW QUALITY PROTEIN: uncharacterized protein LOC111785222 [Cucurbita pepo subsp. pepo] | 0 |
| P04323 | Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1 | 0 | |
| TrEMBL | A0A6D2JF28 | Reverse transcriptase domain-containing protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS29297 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 258 | gene-QYE76_000048, gene-QYE76_001332, gene-QYE76_001432 ... |