Basic Information
Locus ID:
gene-QYE76_014034
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Reverse transcriptase (RNA-dependent DNA polymerase)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 191427875 | 191430874 | + | gene-QYE76_014034 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.33 | 63,049.48 Da | 55.06 | 63.75 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14223 | gag-polypeptide of LTR copia-type | 103 | 221 | 2.8E-10 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 443 | 511 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 446 | 467 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 483 | 506 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 297 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051184190.1 | uncharacterized protein LOC127298341 [Lolium perenne] | 0 |
| Q94HW2 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3L6PMN3 | Retrotran_gag_3 domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM18G09590 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_05.1670.V1.1 |
| Poaceae | Lolium multiflorum | 8 | gene-QYE76_009150, gene-QYE76_013113, gene-QYE76_014034 ... |