Basic Information
Locus ID:
gene-QYE76_014011
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Poly(A) polymerase central domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 190537119 | 190538699 | + | gene-QYE76_014011 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.38 | 58,986.61 Da | 53.42 | 86.20 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05402 | NT_PAP_TUTase | 41 | 196 | 1.9878E-23 | - |
| Pfam | PF04928 | Poly(A) polymerase central domain | 4 | 352 | 8.5E-101 | IPR007012 |
| Pfam | PF01909 | Nucleotidyltransferase domain | 78 | 145 | 5.2E-7 | IPR002934 |
| Pfam | PF04926 | Poly(A) polymerase predicted RNA binding domain | 356 | 419 | 1.7E-11 | IPR007010 |
| SUPERFAMILY | SSF81301 | Nucleotidyltransferase | 2 | 194 | 7.36E-47 | IPR043519 |
| SUPERFAMILY | SSF81631 | PAP/OAS1 substrate-binding domain | 197 | 353 | 5.76E-56 | - |
| SUPERFAMILY | SSF55003 | PAP/Archaeal CCA-adding enzyme, C-terminal domain | 354 | 477 | 1.08E-31 | IPR011068 |
| Gene3D | G3DSA:3.30.70.590 | Poly(A) polymerase predicted RNA binding domain | 355 | 417 | 6.5E-16 | - |
| Gene3D | G3DSA:3.30.70.590 | Poly(A) polymerase predicted RNA binding domain | 418 | 477 | 6.5E-8 | - |
| Gene3D | G3DSA:1.10.1410.10 | - | 4 | 351 | 3.9E-141 | - |
| Gene3D | G3DSA:3.30.460.10 | Beta Polymerase, domain 2 | 34 | 190 | 3.9E-141 | IPR043519 |
| PIRSF | PIRSF018425 | PolyA_polymerase | 2 | 526 | 7.4E-190 | IPR014492 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 497 | 526 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 483 | 526 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32850.7 | nuclear poly(a) polymerase. Encodes a nuclear poly(A) polymerase. Located in the nucleus. | 0 |
| RefSeq | XP_051218843.1 | nuclear poly(A) polymerase 4-like [Lolium perenne] | 0 |
| Q8VYW1 | Nuclear poly(A) polymerase 4 OS=Arabidopsis thaliana OX=3702 GN=PAPS4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6CCN5 | Poly(A) polymerase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology