Basic Information
Locus ID:
gene-QYE76_013823
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 185533097 | 185534212 | - | gene-QYE76_013823 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.03 | 40,968.07 Da | 46.09 | 85.71 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 29 | 163 | 5.51959E-26 | IPR002083 |
| Pfam | PF00917 | MATH domain | 56 | 163 | 6.5E-5 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 186 | 303 | 1.2E-20 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 28 | 168 | 1.6E-26 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 185 | 303 | 4.32E-24 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 16 | 170 | 1.4E-23 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 310 | 371 | 2.2E-7 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 172 | 309 | 3.6E-27 | IPR011333 |
| SMART | SM00225 | BTB_4 | 194 | 306 | 5.1E-18 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 194 | 256 | 15.514545 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 28 | 163 | 19.623857 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_051218656.1 | BTB/POZ and MATH domain-containing protein 2-like [Lolium perenne] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6NL26 | Speckle-type POZ protein-like protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0551320.1.CDS1 |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_013823, gene-QYE76_019885, gene-QYE76_020000 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0201211 |
| Poaceae | Triticum aestivum | 5 | TraesCS6A02G082200.1.cds1, TraesCS6B02G109200.1.cds1 ... |