Basic Information
Locus ID:
gene-QYE76_013821
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
transposition, RNA-mediated
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 185486478 | 185489653 | - | gene-QYE76_013821 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.51 | 74,677.12 Da | 56.17 | 64.38 | -0.96 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 577 | 635 | 4.78E-9 | IPR043502 |
| Gene3D | G3DSA:3.10.10.10 | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 569 | 643 | 2.4E-11 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 261 | 302 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 199 | 236 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 345 | 375 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 428 | 451 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 428 | 452 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 197 | 236 | - | - |
| Coils | Coil | Coil | 358 | 381 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_015969312.1 | uncharacterized protein LOC107492768 [Arachis duranensis] | 0 |
| TrEMBL | A0A2T8HZN5 | Peptidase A2 domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_9G001000 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000027960 |
| Poaceae | Lolium multiflorum | 225 | gene-QYE76_000112, gene-QYE76_000237, gene-QYE76_000651 ... |
| Poaceae | Oryza sativa | 1 | ChrSy.fgenesh.mRNA.19 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr05G009620, Chr05G009630, Chr20G008400 |