Basic Information
Locus ID:
gene-QYE76_013798
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 184728475 | 184729029 | + | gene-QYE76_013798 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.48 | 19,393.65 Da | 67.03 | 74.95 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 113 | 156 | 2.95415E-19 | - |
| Pfam | PF13639 | Ring finger domain | 113 | 156 | 1.2E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 113 | 162 | 2.25E-21 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 89 | 162 | 2.6E-20 | IPR013083 |
| SMART | SM00184 | ring_2 | 114 | 155 | 7.3E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 114 | 156 | 12.386007 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 61 | 100 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 68 | 83 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35000.1 | RING/U-box superfamily protein. E3 ligase-like protein induced by chitin oligomers. | 0 |
| RefSeq | XP_047044556.1 | RING-H2 finger protein ATL39-like [Lolium rigidum] | 0 |
| Q9LRB7 | E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica OX=39947 GN=EL5.1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5Y0V6 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology