Basic Information
Locus ID:
gene-QYE76_013713
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Acyclic terpene utilisation family protein AtuA
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 181813168 | 181816322 | + | gene-QYE76_013713 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.29 | 93,581.21 Da | 49.51 | 81.67 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04434 | SWIM zinc finger | 581 | 607 | 2.0E-6 | IPR007527 |
| Pfam | PF03108 | MuDR family transposase | 221 | 285 | 2.3E-8 | IPR004332 |
| Pfam | PF10551 | MULE transposase domain | 346 | 429 | 8.5E-14 | IPR018289 |
| SMART | SM00575 | 26again6 | 589 | 617 | 4.5E-5 | IPR006564 |
| ProSiteProfiles | PS50966 | Zinc finger SWIM-type profile. | 582 | 614 | 9.532228 | IPR007527 |
| ProSitePatterns | PS01007 | Transposases, Mutator family, signature. | 401 | 425 | - | IPR001207 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 800 | 821 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 159 | 174 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 159 | 185 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_045089570.1 | uncharacterized protein LOC120973752 [Aegilops tauschii subsp. strangulata] | 0 |
| TrEMBL | S5MQP1 | Mutator-like transposase OS=Zea mays OX=4577 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH02.3022, BH09.1174, CH01.3035 |
| Poaceae | Lolium multiflorum | 19 | gene-QYE76_001585, gene-QYE76_001690, gene-QYE76_005059 ... |
| Poaceae | Sporobolus alterniflorus | 8 | Chr02G026660, Chr03G003120, Chr07G005200, Chr09G014280 ... |