Basic Information
Locus ID:
gene-QYE76_013642
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
transposition, RNA-mediated
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 179426844 | 179429249 | + | gene-QYE76_013642 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.55 | 58,630.37 Da | 63.77 | 62.28 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07727 | Reverse transcriptase (RNA-dependent DNA polymerase) | 480 | 543 | 6.0E-14 | IPR013103 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 31 | 49 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 17 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 382 | 428 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 381 | 430 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 49 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_047042985.1 | octanoyltransferase LIP2p, chloroplastic-like [Lolium rigidum] | 0 |
| Q94HW2 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2K3PR99 | Reverse transcriptase Ty1/copia-type domain-containing protein OS=Trifolium pratense OX=57577 GN=L195_g014571 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology