Basic Information
Locus ID:
gene-QYE76_013393
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Chitinase class I
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 171644223 | 171645383 | + | gene-QYE76_013393 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.41 | 40,516.32 Da | 36.76 | 64.35 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06921 | ChtBD1_GH19_hevein | 32 | 68 | 4.21427E-13 | - |
| CDD | cd00325 | chitinase_GH19 | 134 | 368 | 3.30566E-110 | - |
| CDD | cd00035 | ChtBD1 | 76 | 114 | 1.67891E-13 | - |
| Pfam | PF00182 | Chitinase class I | 133 | 368 | 1.9E-121 | IPR000726 |
| Pfam | PF00187 | Chitin recognition protein | 31 | 68 | 1.1E-11 | IPR001002 |
| Pfam | PF00187 | Chitin recognition protein | 76 | 113 | 5.9E-10 | IPR001002 |
| SUPERFAMILY | SSF57016 | Plant lectins/antimicrobial peptides | 76 | 124 | 1.34E-11 | IPR036861 |
| SUPERFAMILY | SSF57016 | Plant lectins/antimicrobial peptides | 31 | 73 | 3.27E-10 | IPR036861 |
| SUPERFAMILY | SSF53955 | Lysozyme-like | 130 | 375 | 3.94E-101 | IPR023346 |
| Gene3D | G3DSA:3.30.20.10 | Endochitinase, domain 2 | 219 | 277 | 1.5E-114 | - |
| Gene3D | G3DSA:3.30.60.10 | - | 29 | 71 | 1.3E-13 | IPR036861 |
| Gene3D | G3DSA:3.30.60.10 | - | 74 | 116 | 6.5E-13 | IPR036861 |
| Gene3D | G3DSA:1.10.530.10 | - | 137 | 374 | 1.5E-114 | - |
| SMART | SM00270 | ChitinBD_3 | 76 | 113 | 2.3E-14 | IPR001002 |
| SMART | SM00270 | ChitinBD_3 | 31 | 68 | 1.1E-14 | IPR001002 |
| PIRSF | PIRSF001060 | Endochitinase | 2 | 75 | 9.8E-7 | IPR016283 |
| PIRSF | PIRSF001060 | Endochitinase | 69 | 375 | 3.2E-119 | IPR016283 |
| ProSiteProfiles | PS50941 | Chitin-binding type-1 domain profile. | 74 | 115 | 10.40351 | IPR001002 |
| ProSiteProfiles | PS50941 | Chitin-binding type-1 domain profile. | 29 | 70 | 10.667047 | IPR001002 |
| ProSitePatterns | PS00773 | Chitinases family 19 signature 1. | 151 | 173 | - | IPR000726 |
| ProSitePatterns | PS00774 | Chitinases family 19 signature 2. | 281 | 291 | - | IPR000726 |
| ProSitePatterns | PS00026 | Chitin recognition or binding domain signature. | 41 | 60 | - | IPR018371 |
| ProSitePatterns | PS00026 | Chitin recognition or binding domain signature. | 86 | 105 | - | IPR018371 |
| PRINTS | PR00451 | Chitin-binding domain signature | 39 | 47 | 1.4E-5 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 47 | 54 | 1.4E-5 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 54 | 61 | 1.4E-5 | IPR001002 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12500.1 | basic chitinase. encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. | 0 |
| RefSeq | XP_051201163.1 | endochitinase-like isoform X1 [Lolium perenne] | 0 |
| Q7DNA1 | Chitinase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Cht2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7K4R8 | chitinase OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology