Basic Information
Locus ID:
gene-QYE76_013069
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 161211366 | 161211950 | - | gene-QYE76_013069 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.27 | 21,149.99 Da | 45.04 | 81.19 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 123 | 185 | 4.3846E-17 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 121 | 184 | 9.4E-14 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 46 | 108 | 1.2E-14 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 33 | 185 | 4.85E-42 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 113 | 191 | 4.7E-23 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 13 | 112 | 7.2E-24 | - |
| SMART | SM00054 | efh_1 | 159 | 187 | 5.5E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 47 | 75 | 2.3E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 83 | 111 | 0.048 | IPR002048 |
| SMART | SM00054 | efh_1 | 123 | 151 | 1.6E-4 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 119 | 154 | 14.736568 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 155 | 190 | 13.341799 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 79 | 114 | 10.468573 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 43 | 78 | 14.5413 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 56 | 68 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 92 | 104 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 132 | 144 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 168 | 180 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 42 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 35 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G32250.1 | Calcium-binding EF-hand family protein. | 0 |
| RefSeq | XP_051199241.1 | probable calcium-binding protein CML11 [Lolium perenne] | 0 |
| Q9AWK2 | Probable calcium-binding protein CML11 OS=Oryza sativa subsp. japonica OX=39947 GN=CML11 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8I6WIN9 | Calcium-binding protein CML11 OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology