Basic Information
Locus ID:
gene-QYE76_012656
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
gag-polypeptide of LTR copia-type
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 148444753 | 148447944 | + | gene-QYE76_012656 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.97 | 66,870.37 Da | 48.31 | 66.75 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14223 | gag-polypeptide of LTR copia-type | 354 | 487 | 5.3E-18 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 489 | 543 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 523 | 537 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 135 | 168 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 85 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051211614.1 | uncharacterized protein LOC127329110 [Lolium perenne] | 0 |
| TrEMBL | A0A453NWQ9 | gag_pre-integrs domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 28 | gene-QYE76_000512, gene-QYE76_000878, gene-QYE76_001935 ... |