Basic Information
Locus ID:
gene-QYE76_012388
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Hippocampus abundant transcript-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 138954552 | 138960651 | + | gene-QYE76_012388 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.62 | 46,321.20 Da | 36.53 | 108.34 | 0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 11 | 422 | 1.25484E-45 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 13 | 384 | 9.6E-24 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 14 | 426 | 1.7E-39 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 6 | 427 | 8.2E-40 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 1 | 430 | 12.16441 | IPR020846 |
| ProSitePatterns | PS00216 | Sugar transport proteins signature 1. | 69 | 86 | - | IPR005829 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_051194551.1 | uncharacterized protein LOC127307803 isoform X2 [Lolium perenne] | 0 |
| P02982 | Tetracycline resistance protein, class A OS=Escherichia coli OX=562 GN=tetA PE=3 SV=2 | 0 | |
| TrEMBL | A0A3B5Y0W0 | MFS domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology