Basic Information
Locus ID:
gene-QYE76_012197
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Aspartyl protease
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 132358282 | 132363643 | + | gene-QYE76_012197 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.58 | 79,163.97 Da | 54.70 | 86.65 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09274 | RNase_HI_RT_Ty3 | 362 | 482 | 1.61007E-50 | - |
| Pfam | PF17917 | RNase H-like domain found in reverse transcriptase | 373 | 461 | 7.2E-28 | IPR041373 |
| Pfam | PF03732 | Retrotransposon gag protein | 9 | 99 | 1.5E-9 | IPR005162 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 372 | 465 | 2.08E-21 | IPR043502 |
| Gene3D | G3DSA:3.10.20.370 | - | 367 | 432 | 2.1E-6 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 520 | 539 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 510 | 553 | - | - |
| Coils | Coil | Coil | 664 | 684 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_048538050.1 | uncharacterized protein LOC125516778, partial [Triticum urartu] | 0 |
| Q8I7P9 | Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1 | 0 | |
| TrEMBL | A0A392NXT0 | RT_RNaseH domain-containing protein (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0025634 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 203 | gene-QYE76_000478, gene-QYE76_000950, gene-QYE76_001438 ... |