Basic Information
Locus ID:
gene-QYE76_012039
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Variant SH3 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 126361597 | 126373012 | - | gene-QYE76_012039 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.99 | 68,784.34 Da | 47.96 | 81.84 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01985 | CRS1 / YhbY (CRM) domain | 470 | 554 | 8.7E-14 | IPR001890 |
| Pfam | PF14604 | Variant SH3 domain | 307 | 348 | 2.0E-7 | IPR001452 |
| SUPERFAMILY | SSF50044 | SH3-domain | 262 | 347 | 1.71E-10 | IPR036028 |
| SUPERFAMILY | SSF75471 | YhbY-like | 468 | 559 | 2.09E-16 | IPR035920 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 44 | 255 | 2.09E-23 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 262 | 348 | 2.3E-9 | - |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 42 | 261 | 1.9E-10 | IPR027267 |
| Gene3D | G3DSA:3.30.110.60 | - | 467 | 566 | 3.9E-28 | IPR035920 |
| SMART | SM01103 | CRS1_YhbY_2 | 468 | 554 | 3.2E-17 | IPR001890 |
| ProSiteProfiles | PS51295 | CRM domain profile. | 466 | 565 | 16.439133 | IPR001890 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 557 | 578 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 557 | 625 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 598 | 625 | - | - |
| Coils | Coil | Coil | 427 | 454 | - | - |
| Coils | Coil | Coil | 241 | 261 | - | - |
| Coils | Coil | Coil | 146 | 173 | - | - |
| Coils | Coil | Coil | 183 | 210 | - | - |
| Coils | Coil | Coil | 1 | 21 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34660.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_051192530.1 | SH3 domain-containing protein 2-like isoform X2 [Lolium perenne] | 0 |
| Q8VWF1 | SH3 domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SH3P2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6SDC6 | SH3 domain-containing protein 2-like isoform X2 OS=Panicum miliaceum OX=4540 GN=C2845_PM02G09640 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology