Basic Information
Locus ID:
gene-QYE76_011777
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
DnaJ molecular chaperone homology domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 116855250 | 116859298 | + | gene-QYE76_011777 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.78 | 19,590.05 Da | 46.42 | 59.42 | -1.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00098 | Zinc knuckle | 143 | 158 | 1.0E-4 | IPR001878 |
| SUPERFAMILY | SSF57756 | Retrovirus zinc finger-like domains | 129 | 161 | 1.96E-7 | IPR036875 |
| Gene3D | G3DSA:4.10.60.10 | - | 110 | 171 | 2.4E-5 | - |
| SMART | SM00343 | c2hcfinal6 | 142 | 158 | 0.0045 | IPR001878 |
| ProSiteProfiles | PS50158 | Zinc finger CCHC-type profile. | 143 | 158 | 8.89451 | IPR001878 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 109 | 123 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 106 | 135 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 61 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051212695.1 | uncharacterized protein LOC127330570 [Lolium perenne] | 0 |
| TrEMBL | D2Y4E0 | Putative polyprotein (Fragment) OS=Secale cereale OX=4550 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah030472 |
| Poaceae | Lolium multiflorum | 226 | gene-QYE76_000514, gene-QYE76_000718, gene-QYE76_000828 ... |