Basic Information
Locus ID:
gene-QYE76_011773
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
ATPase family associated with various cellular activities (AAA)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 116671140 | 116681775 | + | gene-QYE76_011773 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.79 | 256,480.19 Da | 48.70 | 72.02 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00665 | Integrase core domain | 504 | 601 | 1.8E-8 | IPR001584 |
| Pfam | PF14223 | gag-polypeptide of LTR copia-type | 77 | 207 | 7.1E-15 | - |
| Pfam | PF07727 | Reverse transcriptase (RNA-dependent DNA polymerase) | 843 | 982 | 1.9E-51 | IPR013103 |
| Pfam | PF13976 | GAG-pre-integrase domain | 416 | 487 | 2.0E-15 | IPR025724 |
| Pfam | PF02902 | Ulp1 protease family, C-terminal catalytic domain | 2144 | 2248 | 5.3E-9 | IPR003653 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 2065 | 2249 | 1.12E-19 | IPR038765 |
| SUPERFAMILY | SSF53098 | Ribonuclease H-like | 498 | 658 | 8.5E-40 | IPR012337 |
| SUPERFAMILY | SSF57756 | Retrovirus zinc finger-like domains | 247 | 277 | 2.72E-7 | IPR036875 |
| Gene3D | G3DSA:3.40.395.10 | Adenoviral Proteinase; Chain A | 2064 | 2255 | 4.1E-17 | - |
| Gene3D | G3DSA:4.10.60.10 | - | 225 | 289 | 1.8E-6 | - |
| Gene3D | G3DSA:3.30.420.10 | - | 494 | 680 | 1.8E-40 | IPR036397 |
| SMART | SM00343 | c2hcfinal6 | 257 | 273 | 0.0048 | IPR001878 |
| ProSiteProfiles | PS50994 | Integrase catalytic domain profile. | 487 | 663 | 21.807405 | IPR001584 |
| ProSiteProfiles | PS50158 | Zinc finger CCHC-type profile. | 258 | 273 | 9.059338 | IPR001878 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1540 | 1560 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1291 | 1334 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1721 | 1747 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1276 | 1290 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1276 | 1334 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1882 | 1930 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1410 | 1492 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1721 | 1737 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1520 | 1560 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1466 | 1492 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1444 | 1465 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1987 | 2002 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 752 | 793 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1410 | 1429 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1845 | 2016 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 769 | 793 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 226 | 242 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1935 | 1961 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 226 | 250 | - | - |
| Coils | Coil | Coil | 1677 | 1697 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23160.2 | - | 0 |
| RefSeq | XP_047064419.1 | uncharacterized protein LOC124672191, partial [Lolium rigidum] | 0 |
| P10978 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8I6XJV0 | Polyprotein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 10 | gene-QYE76_011631, gene-QYE76_011773, gene-QYE76_014559 ... |