Basic Information
Locus ID:
gene-QYE76_010780
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Integrase core domain containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 75601252 | 75608145 | + | gene-QYE76_010780 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 103,009.97 Da | 53.55 | 84.73 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00303 | retropepsin_like | 414 | 511 | 4.67406E-13 | - |
| Pfam | PF03732 | Retrotransposon gag protein | 114 | 204 | 3.3E-9 | IPR005162 |
| SUPERFAMILY | SSF50630 | Acid proteases | 410 | 519 | 7.5E-5 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 395 | 536 | 3.0E-18 | IPR021109 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 67 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 733 | 760 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 746 | 760 | - | - |
| Coils | Coil | Coil | 880 | 900 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039682991.1 | uncharacterized protein LOC120576082 [Medicago truncatula] | 0 |
| TrEMBL | M8BEJ4 | Uncharacterized protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 203 | gene-QYE76_000478, gene-QYE76_000950, gene-QYE76_001438 ... |