Basic Information
Locus ID:
gene-QYE76_010709
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Glycosyl hydrolases family 28
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 73055950 | 73058568 | - | gene-QYE76_010709 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.88 | 52,154.96 Da | 43.79 | 75.81 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00295 | Glycosyl hydrolases family 28 | 129 | 444 | 1.0E-85 | IPR000743 |
| SUPERFAMILY | SSF51126 | Pectin lyase-like | 87 | 481 | 3.43E-123 | IPR011050 |
| Gene3D | G3DSA:2.160.20.10 | - | 83 | 476 | 2.1E-114 | IPR012334 |
| SMART | SM00710 | pbh1 | 258 | 284 | 2500.0 | IPR006626 |
| SMART | SM00710 | pbh1 | 308 | 328 | 4300.0 | IPR006626 |
| SMART | SM00710 | pbh1 | 338 | 359 | 4.7 | IPR006626 |
| SMART | SM00710 | pbh1 | 285 | 306 | 1500.0 | IPR006626 |
| SMART | SM00710 | pbh1 | 367 | 388 | 580.0 | IPR006626 |
| ProSitePatterns | PS00502 | Polygalacturonase active site. | 315 | 328 | - | IPR000743 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 35 | 60 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Module:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48100.1 | Pectin lyase-like superfamily protein. | 0 |
| RefSeq | XP_047044810.1 | polygalacturonase At1g48100-like [Lolium rigidum] | 0 |
| Q949Z1 | Polygalacturonase At1g48100 OS=Arabidopsis thaliana OX=3702 GN=At1g48100 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7RCZ4 | Polygalacturonase OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology