Basic Information
Locus ID:
gene-QYE76_010499
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
protein kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 66265650 | 66276210 | + | gene-QYE76_010499 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 117,158.45 Da | 47.51 | 84.33 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09274 | RNase_HI_RT_Ty3 | 768 | 848 | 3.25088E-31 | - |
| CDD | cd01647 | RT_LTR | 535 | 674 | 3.09609E-60 | - |
| Pfam | PF03732 | Retrotransposon gag protein | 123 | 201 | 6.9E-9 | IPR005162 |
| Pfam | PF00078 | Reverse transcriptase (RNA-dependent DNA polymerase) | 515 | 673 | 3.7E-22 | IPR000477 |
| Pfam | PF17919 | RNase H-like domain found in reverse transcriptase | 737 | 786 | 5.7E-14 | IPR041577 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 506 | 831 | 1.96E-102 | IPR043502 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 335 | 438 | 2.2E-5 | IPR021109 |
| Gene3D | G3DSA:3.30.70.270 | - | 539 | 674 | 1.4E-45 | IPR043128 |
| Gene3D | G3DSA:3.30.70.270 | - | 683 | 776 | 2.0E-27 | IPR043128 |
| Gene3D | G3DSA:3.10.10.10 | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 535 | 599 | 1.4E-45 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 38 | 67 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 67 | - | - |
| Coils | Coil | Coil | 911 | 931 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_048538050.1 | uncharacterized protein LOC125516778, partial [Triticum urartu] | 0 |
| P04323 | Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1 | 0 | |
| TrEMBL | A0A392M0H0 | RNA-directed DNA polymerase (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0001543 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 258 | gene-QYE76_000048, gene-QYE76_001332, gene-QYE76_001432 ... |