Basic Information
Locus ID:
gene-QYE76_009843
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Acyl-CoA dehydrogenase, N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 45990219 | 45994042 | - | gene-QYE76_009843 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.58 | 87,171.80 Da | 49.09 | 92.04 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13966 | zinc-binding in reverse transcriptase | 608 | 692 | 2.7E-25 | IPR026960 |
| Pfam | PF02771 | Acyl-CoA dehydrogenase, N-terminal domain | 57 | 165 | 6.7E-23 | IPR013786 |
| Pfam | PF00078 | Reverse transcriptase (RNA-dependent DNA polymerase) | 275 | 364 | 4.2E-7 | IPR000477 |
| Pfam | PF02770 | Acyl-CoA dehydrogenase, middle domain | 171 | 261 | 3.2E-19 | IPR006091 |
| SUPERFAMILY | SSF56645 | Acyl-CoA dehydrogenase NM domain-like | 47 | 261 | 8.12E-56 | IPR009100 |
| Gene3D | G3DSA:1.10.540.10 | - | 37 | 169 | 2.4E-39 | IPR037069 |
| Gene3D | G3DSA:2.40.110.10 | - | 170 | 267 | 1.7E-25 | - |
Gene Ontology
KEGG Pathway
Pathway:
ko00071 (Fatty acid degradation)
map00071 (Fatty acid degradation)
ko00592 (alpha-Linolenic acid metabolism)
map00592 (alpha-Linolenic acid metabolism)
ko01040 (Biosynthesis of unsaturated fatty acids)
map01040 (Biosynthesis of unsaturated fatty acids)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
ko01212 (Fatty acid metabolism)
map01212 (Fatty acid metabolism)
ko03320 (PPAR signaling pathway)
map03320 (PPAR signaling pathway)
ko04024 (cAMP signaling pathway)
map04024 (cAMP signaling pathway)
ko04146 (Peroxisome)
map04146 (Peroxisome)
Reaction:
R01175 (Butanoyl-CoA + FAD <=> FADH2 + Crotonoyl-CoA)
R01279 (Palmitoyl-CoA + FAD <=> trans-Hexadec-2-enoyl-CoA + FADH2)
R03777 (Octanoyl-CoA + FAD <=> trans-Oct-2-enoyl-CoA + FADH2)
R03857 (Lauroyl-CoA + FAD <=> 2-trans-Dodecenoyl-CoA + FADH2)
R03990 (Tetradecanoyl-CoA + FAD <=> trans-Tetradec-2-enoyl-CoA + FADH2)
R04751 (Hexanoyl-CoA + FAD <=> trans-Hex-2-enoyl-CoA + FADH2)
R04754 (Decanoyl-CoA + FAD <=> trans-Dec-2-enoyl-CoA + FADH2)
R07888 (OPC8-CoA + FAD <=> trans-2-Enoyl-OPC8-CoA + FADH2)
R07892 (OPC6-CoA + FAD <=> trans-2-Enoyl-OPC6-CoA + FADH2)
R07896 (OPC4-CoA + FAD <=> trans-2-Enoyl-OPC4-CoA + FADH2)
R07934 ((6Z,9Z,12Z,15Z,18Z,21Z)-Tetracosahexaenoyl-CoA + Oxygen <=> (2E,6Z,9Z,12Z,15Z,18Z,21Z)-Tetracosaheptaenoyl-CoA + Hydrogen peroxide)
R07950 ((6Z,9Z,12Z,15Z,18Z)-Tetracosapentaenoyl-CoA + Oxygen <=> (2E,6Z,9Z,12Z,15Z,18Z)-Tetracosahexaenoyl-CoA + Hydrogen peroxide)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51840.1 | acyl-CoA oxidase 4. Encodes a short-chain acyl-CoA oxidase, which catalyzes the first step of peroxisomal fatty acid beta-oxidation during early, post-germinative growth in oilseed species. Null mutants virtually lack short-chain acyl-CoA and are resistant to 2,4-dichlorophenoxybutyric acid, which is converted to the herbicide and auxin analogue 2,4-dichlorophenoxyacetic acid by beta-oxidation. Despite the almost complete loss of short-chain activity, lipid catabolism and seedling growth and establishment was unaltered in the acx4 mutant. However, double mutants in acx3acx4 (acx3 encodes medium chain acyl CoA oxidase) were not viable and arrested during embryogenesis. | 0 |
| RefSeq | XP_051219522.1 | uncharacterized protein LOC127336721 [Lolium perenne] | 0 |
| Q96329 | Acyl-coenzyme A oxidase 4, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=ACX4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453B5Y2 | Reverse transcriptase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology