Basic Information
Locus ID:
gene-QYE76_009815
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 45202101 | 45204900 | + | gene-QYE76_009815 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.79 | 44,799.15 Da | 42.27 | 78.25 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 256 | 282 | 0.094 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 42 | 287 | 2.44E-28 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 32 | 310 | 3.4E-17 | IPR015943 |
| SMART | SM00320 | WD40_4 | 27 | 65 | 250.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 242 | 283 | 0.12 | IPR001680 |
| SMART | SM00320 | WD40_4 | 199 | 239 | 0.11 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 32 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G40810.1 | homolog of yeast autophagy 18C. | 0 |
| RefSeq | XP_051178488.1 | autophagy-related protein 18c-like [Lolium perenne] | 0 |
| Q8GYD7 | Autophagy-related protein 18c OS=Arabidopsis thaliana OX=3702 GN=ATG18C PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7JYU7 | Autophagy-related protein 18c OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology