Basic Information
Locus ID:
gene-QYE76_009754
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
transposition, RNA-mediated
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 43536767 | 43548993 | + | gene-QYE76_009754 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 109,340.48 Da | 57.43 | 80.31 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03732 | Retrotransposon gag protein | 207 | 297 | 4.8E-8 | IPR005162 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 700 | 762 | 7.89E-12 | IPR043502 |
| Gene3D | G3DSA:3.10.10.10 | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 691 | 795 | 3.1E-16 | - |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 488 | 603 | 3.2E-5 | IPR021109 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 794 | 829 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 806 | 826 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 34 | - | - |
| Coils | Coil | Coil | 942 | 962 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021750881.1 | uncharacterized protein LOC110716562 [Chenopodium quinoa] | 0 |
| TrEMBL | M8BEJ4 | Uncharacterized protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 203 | gene-QYE76_000478, gene-QYE76_000950, gene-QYE76_001438 ... |