HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: gene-QYE76_009261
Species & Taxonomic ID: Lolium multiflorum & 4521
Genome Assembly: GCA_030979885.1
Description: A Receptor for Ubiquitination Targets
Maps and Mapping Data
Chromosome Start End Strand ID
chr1 26567663 26576448 - gene-QYE76_009261
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.84 46,756.73 Da 52.27 89.35 -0.25
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 18 56 2.7E-5 IPR001810
SUPERFAMILY SSF52047 RNI-like 145 223 2.16E-6 -
SUPERFAMILY SSF81383 F-box domain 7 56 8.9E-10 IPR036047
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 138 246 3.5E-6 IPR032675
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G03100.1 F-box/RNI-like superfamily protein. 0
RefSeq XP_051228915.1 F-box protein At5g03100-like isoform X2 [Lolium perenne] 0
Swiss-Prot Q501G5 F-box protein At5g03100 OS=Arabidopsis thaliana OX=3702 GN=At5g03100 PE=2 SV=1 0
TrEMBL A0A5J9USN1 F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_28939 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Lolium multiflorum 4 gene-QYE76_009256, gene-QYE76_009261, gene-QYE76_064339 ...
gene-QYE76_064445
Poaceae Paspalum vaginatum 1 gene-BS78_05G107200
Poaceae Thinopyrum elongatum 1 Tel4E01G163700
Poaceae Triticum aestivum 1 TraesCS4B02G103300.1
Poaceae Zoysia japonica 1 nbis-gene-27270
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.