halophFGD

Basic Information

Locus ID: gene-QYE76_009175

Species & Taxonomic ID: Lolium multiflorum & 4521

Genome Assembly: GCA_030979885.1

Description: Reverse transcriptase (RNA-dependent DNA polymerase)

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr1	23951893	23954779	+	gene-QYE76_009175

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.92	48,045.67 Da	45.80	66.62	-0.58

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07727	Reverse transcriptase (RNA-dependent DNA polymerase)	291	404	2.5E-11	IPR013103
MobiDBLite	mobidb-lite	consensus disorder prediction	81	119	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	100	119	-	-

Best hit

Source	Best Hit ID	Description
TAIR	AT4G23160.2	-
RefSeq	XP_051199707.1	uncharacterized protein LOC127313195 [Lolium perenne]
Swiss-Prot	P92519	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1
TrEMBL	A0A2K2CPV5	Reverse transcriptase Ty1/copia-type domain-containing protein OS=Brachypodium distachyon OX=15368 GN=BRADI_4g23960v3 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Lolium multiflorum	30	gene-QYE76_001210, gene-QYE76_002996, gene-QYE76_004554 ... gene-QYE76_005935, gene-QYE76_006987, gene-QYE76_008702, gene-QYE76_008966, gene-QYE76_009175, gene-QYE76_013290, gene-QYE76_014802, gene-QYE76_015722, gene-QYE76_016564, gene-QYE76_017740, gene-QYE76_019445, gene-QYE76_020285, gene-QYE76_021024, gene-QYE76_021605, gene-QYE76_023259, gene-QYE76_024886, gene-QYE76_027970, gene-QYE76_029732, gene-QYE76_032966, gene-QYE76_036363, gene-QYE76_036522, gene-QYE76_049464, gene-QYE76_055318, gene-QYE76_058712, gene-QYE76_059938, gene-QYE76_061699, gene-QYE76_071624