Basic Information
Locus ID:
gene-QYE76_008966
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 18254136 | 18269871 | + | gene-QYE76_008966 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.83 | 106,264.96 Da | 60.66 | 56.42 | -0.80 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00847 | AP2 domain | 9 | 52 | 1.8E-4 | IPR001471 |
| SUPERFAMILY | SSF54171 | DNA-binding domain | 10 | 65 | 3.66E-12 | IPR016177 |
| Gene3D | G3DSA:3.30.730.10 | AP2/ERF domain | 10 | 67 | 1.3E-14 | IPR036955 |
| SMART | SM00380 | rav1_2 | 10 | 71 | 3.5E-13 | IPR001471 |
| ProSiteProfiles | PS51032 | AP2/ERF domain profile. | 10 | 65 | 17.082014 | IPR001471 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 832 | 857 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 553 | 568 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 305 | 332 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 131 | 279 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 551 | 580 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 214 | 255 | - | - |
| Coils | Coil | Coil | 296 | 326 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G43160.1 | related to AP2 6. encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family (RAP2.6). The protein contains one AP2 domain. There are 7 members in this subfamily. | 0 |
| RefSeq | XP_051221053.1 | uncharacterized protein LOC127339216 [Lolium perenne] | 0 |
| Q7G1L2 | Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana OX=3702 GN=RAP2-6 PE=2 SV=2 | 0 | |
| TrEMBL | M8BFX2 | Putative cysteine-rich receptor-like protein kinase 39 OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 30 | gene-QYE76_001210, gene-QYE76_002996, gene-QYE76_004554 ... |