Basic Information
Locus ID:
gene-QYE76_008875
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 14743420 | 14744565 | - | gene-QYE76_008875 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.60 | 41,096.49 Da | 79.38 | 54.44 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16667 | RING-H2_RNF126_like | 190 | 231 | 1.57929E-23 | - |
| Pfam | PF14369 | zinc-ribbon | 13 | 44 | 2.0E-14 | IPR039525 |
| Pfam | PF13639 | Ring finger domain | 189 | 231 | 3.6E-11 | IPR001841 |
| Pfam | PF06547 | Protein of unknown function (DUF1117) | 255 | 361 | 4.0E-42 | IPR010543 |
| SUPERFAMILY | SSF57850 | RING/U-box | 170 | 237 | 1.57E-20 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 154 | 237 | 5.9E-21 | IPR013083 |
| SMART | SM00184 | ring_2 | 190 | 230 | 1.8E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 190 | 231 | 12.031935 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 367 | 381 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 333 | 381 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 49 | 88 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G59550.1 | zinc finger (C3HC4-type RING finger) family protein. | 0 |
| RefSeq | XP_051224318.1 | E3 ubiquitin-protein ligase RDUF2-like [Lolium perenne] | 0 |
| Q940T5 | E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5YR03 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology