Basic Information
Locus ID:
gene-QYE76_008837
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
protein dimerization activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 14113545 | 14118080 | + | gene-QYE76_008837 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.36 | 96,822.74 Da | 54.84 | 73.99 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF57667 | beta-beta-alpha zinc fingers | 675 | 719 | 3.86E-6 | IPR036236 |
| Gene3D | G3DSA:3.30.160.60 | Classic Zinc Finger | 663 | 741 | 7.8E-7 | - |
| ProSiteProfiles | PS50157 | Zinc finger C2H2 type domain profile. | 669 | 699 | 10.553974 | IPR013087 |
| ProSitePatterns | PS00028 | Zinc finger C2H2 type domain signature. | 671 | 694 | - | IPR013087 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 536 | 550 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 518 | 570 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 556 | 570 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051224679.1 | uncharacterized protein LOC127342714 isoform X1 [Lolium perenne] | 0 |
| TrEMBL | A0A3B5ZMZ2 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | BH02.1933, CH02.1946 |
| Poaceae | Eleusine coracana subsp. coracana | 5 | gene-QOZ80_4BG0352940, gene-QOZ80_6AG0533510 ... |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_008233, gene-QYE76_008236, gene-QYE76_008837 ... |
| Poaceae | Oryza coarctata | 2 | Oco01G010670, Oco01G011070 |
| Poaceae | Oryza sativa | 2 | LOC_Os01g28520.1, LOC_Os01g32640.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G371000 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0500709, Pt_Chr0704898 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr19G000930, Chr25G013870, Chr25G013880, Chr27G016500 |
| Poaceae | Thinopyrum elongatum | 3 | Tel1E01G069100, Tel1E01G099600, Tel1E01G744700 |
| Poaceae | Triticum aestivum | 8 | TraesCS1A02G439200.1, TraesCS1B02G055300.1 ... |