Basic Information
Locus ID:
gene-QYE76_008702
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
structural constituent of cell wall
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 10007055 | 10011601 | + | gene-QYE76_008702 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.38 | 61,730.88 Da | 71.13 | 37.08 | -1.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11523 | Protein of unknown function (DUF3223) | 10 | 41 | 7.0E-11 | - |
| Gene3D | G3DSA:3.10.450.40 | - | 3 | 47 | 9.4E-9 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 268 | 548 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 269 | 291 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 76 | 105 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 303 | 537 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 67 | 105 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G40030.1 | nuclear RNA polymerase D1B. Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase V; homologous to budding yeast RPB1 and the E. coli RNA polymerase beta prime subunit. Required for normal RNA-directed DNA methylation at non-CG methylation sites and transgene silencing. | 0 |
| RefSeq | XP_051197259.1 | uncharacterized protein LOC127310646 [Lolium perenne] | 0 |
| Q5D869 | DNA-directed RNA polymerase V subunit 1 OS=Arabidopsis thaliana OX=3702 GN=NRPE1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453NCR2 | Actin-binding transcription modulator OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 30 | gene-QYE76_001210, gene-QYE76_002996, gene-QYE76_004554 ... |