Basic Information
Locus ID:
gene-QYE76_008479
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 2492272 | 2495897 | - | gene-QYE76_008479 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.63 | 75,667.75 Da | 44.32 | 84.72 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13966 | zinc-binding in reverse transcriptase | 353 | 430 | 2.1E-12 | IPR026960 |
| Pfam | PF00646 | F-box domain | 18 | 50 | 1.0E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 16 | 72 | 1.31E-12 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 12 | 64 | 5.0E-8 | - |
| SMART | SM00256 | fbox_2 | 19 | 59 | 9.7E-6 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 108 | 130 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 108 | 134 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051226998.1 | uncharacterized protein LOC127344697 [Lolium perenne] | 0 |
| TrEMBL | A0A835KBS7 | zf-RVT domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_020482 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.7BG0018400 |
| Poaceae | Echinochloa crus-galli | 11 | AH01.3501, AH06.331, AH07.270, BH01.462, BH07.1564, CH03.782 ... |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_3AG0250430 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0278890.1.CDS1 |
| Poaceae | Lolium multiflorum | 14 | gene-QYE76_006881, gene-QYE76_007068, gene-QYE76_008479 ... |
| Poaceae | Oryza sativa | 2 | LOC_Os02g04410.1, LOC_Os10g21479.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_K007300 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0106216, Pt_Chr0704471 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr11G019810 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G701600 |
| Poaceae | Triticum aestivum | 1 | TraesCS4B02G395400.1 |