HalophFGD

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Basic Information
Locus ID: gene-QYE76_008216
Species & Taxonomic ID: Lolium multiflorum & 4521
Genome Assembly: GCA_030979885.1
Description: Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
Chromosome Start End Strand ID
unplaced_60 11602 13427 + gene-QYE76_008216
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.77 52,888.51 Da 44.61 85.47 -0.21
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 363 377 - -
MobiDBLite mobidb-lite consensus disorder prediction 362 381 - -
KEGG Pathway
KO Term:
K10581 (ubiquitin-conjugating enzyme E2 O [EC:2.3.2.24])
Pathway:
ko04120 (Ubiquitin mediated proteolysis) map04120 (Ubiquitin mediated proteolysis)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_047080203.1 probable ubiquitin-conjugating enzyme E2 23 [Lolium rigidum] 0
TrEMBL A0A3B6CAS2 UBC core domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 1 CH05.3665
Poaceae Hordeum vulgare 2 HORVU.MOREX.r3.2HG0210000.1, HORVU.MOREX.r3.3HG0223690.1
Poaceae Lolium multiflorum 11 gene-QYE76_008216, gene-QYE76_026496, gene-QYE76_047469 ...
gene-QYE76_047471, gene-QYE76_047538, gene-QYE76_047539, gene-QYE76_047540, gene-QYE76_047547, gene-QYE76_047548, gene-QYE76_055707, gene-QYE76_061271
Poaceae Oryza sativa 1 LOC_Os05g06120.1
Poaceae Puccinellia tenuiflora 1 Pt_Chr0203400
Poaceae Thinopyrum elongatum 2 Tel2E01G971600, Tel3E01G051900
Poaceae Triticum aestivum 17 TraesCS2A02G403400.1, TraesCS2A02G586300.1 ...
TraesCS2B02G421500.1, TraesCS2B02G461900.1, TraesCS2B02G590300.1, TraesCS2B02G590500.1, TraesCS2B02G590700.1, TraesCS2B02G596800.1, TraesCS2D02G400600.1, TraesCS2D02G600300.1, TraesCS3A02G030400.1, TraesCS3A02G031600.1, TraesCS3B02G029000.1, TraesCS3B02G029100.1, TraesCS3D02G015200.1, TraesCS3D02G015300.1, TraesCS5B02G359000.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.