Basic Information
Locus ID:
gene-QYE76_007904
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| unplaced_56 | 114507 | 118244 | + | gene-QYE76_007904 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.42 | 54,014.85 Da | 43.28 | 69.98 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 201 | 477 | 3.8236E-39 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 441 | 477 | 1.9E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 352 | 392 | 0.0015 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 312 | 347 | 7.5E-6 | IPR001680 |
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 233 | 288 | 3.3E-5 | IPR024977 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 180 | 500 | 3.66E-60 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 174 | 482 | 4.8E-127 | IPR015943 |
| SMART | SM00320 | WD40_4 | 395 | 435 | 460.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 267 | 304 | 0.27 | IPR001680 |
| SMART | SM00320 | WD40_4 | 308 | 347 | 1.7E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 350 | 392 | 1.1E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 438 | 477 | 3.6E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 180 | 221 | 140.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 224 | 264 | 0.057 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 315 | 347 | 11.022865 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 232 | 273 | 9.271977 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 445 | 478 | 14.184453 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 445 | 478 | 11.73468 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 315 | 356 | 13.649761 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 464 | 478 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 67 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 67 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22910.1 | FIZZY-related 2. | 0 |
| RefSeq | XP_047083146.1 | protein FIZZY-RELATED 2-like [Lolium rigidum] | 0 |
| Q8L3Z8 | Protein FIZZY-RELATED 2 OS=Arabidopsis thaliana OX=3702 GN=FZR2 PE=1 SV=1 | 0 | |
| TrEMBL | F2E2N2 | Predicted protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology