Basic Information
Locus ID:
gene-QYE76_007415
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
UBX domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 241277649 | 241278893 | + | gene-QYE76_007415 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.92 | 45,140.30 Da | 54.70 | 70.36 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01767 | UBX | 339 | 409 | 2.47709E-9 | - |
| CDD | cd02958 | UAS | 153 | 271 | 1.16067E-34 | - |
| Pfam | PF00789 | UBX domain | 334 | 405 | 2.1E-7 | IPR001012 |
| Pfam | PF13899 | Thioredoxin-like | 158 | 243 | 1.2E-12 | - |
| Pfam | PF14555 | UBA-like domain | 8 | 47 | 2.5E-8 | - |
| SUPERFAMILY | SSF52833 | Thioredoxin-like | 131 | 271 | 8.72E-27 | IPR036249 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 304 | 409 | 2.17E-12 | IPR029071 |
| Gene3D | G3DSA:3.40.30.10 | Glutaredoxin | 154 | 273 | 4.8E-29 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 4 | 47 | 2.4E-7 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 280 | 413 | 7.3E-11 | - |
| SMART | SM00594 | 45neu3 | 140 | 267 | 3.9E-16 | IPR006577 |
| ProSiteProfiles | PS50033 | UBX domain profile. | 333 | 412 | 14.110744 | IPR001012 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 288 | 304 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 288 | 308 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 118 | 135 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 71 | 135 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G14570.3 | UBX domain-containing protein. | 0 |
| RefSeq | XP_051190984.1 | plant UBX domain-containing protein 7-like [Lolium perenne] | 0 |
| Q94JZ8 | Plant UBX domain-containing protein 7 OS=Arabidopsis thaliana OX=3702 GN=PUX7 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6C1C4 | UBX domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 5 | AH03.861, AH07.2773, BH03.985, BH07.2584, CH07.2650 |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_2AG0138910, gene-QOZ80_2BG0194560 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.2HG0117420.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 6 | gene-QYE76_007415, gene-QYE76_023963, gene-QYE76_023966 ... |
| Poaceae | Oryza coarctata | 3 | Oco04G017190, Oco13G005150, Oco14G006110 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g42800.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G208100 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr06G013060, Chr09G024940, Chr09G024970, Chr15G015460 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2BG020080, gene_TRIDC6AG036470 |
| Poaceae | Triticum aestivum | 5 | TraesCS2A02G133200.1.cds1, TraesCS2B02G156700.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb185740_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-27667, nbis-gene-9357 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g13983 |