Basic Information
Locus ID:
gene-QYE76_007364
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
DNA binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 240113322 | 240120036 | - | gene-QYE76_007364 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.79 | 172,738.02 Da | 44.32 | 87.18 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14798 | RX-CC_like | 406 | 506 | 1.66074E-7 | IPR038005 |
| CDD | cd00018 | AP2 | 1379 | 1438 | 2.90823E-22 | IPR001471 |
| Pfam | PF00931 | NB-ARC domain | 579 | 818 | 2.1E-41 | IPR002182 |
| Pfam | PF18052 | Rx N-terminal domain | 406 | 492 | 5.0E-9 | IPR041118 |
| Pfam | PF00069 | Protein kinase domain | 32 | 308 | 4.0E-51 | IPR000719 |
| Pfam | PF00847 | AP2 domain | 1379 | 1428 | 2.6E-13 | IPR001471 |
| SUPERFAMILY | SSF52058 | L domain-like | 896 | 1261 | 3.74E-19 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 11 | 310 | 1.2E-69 | IPR011009 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 563 | 831 | 9.96E-55 | IPR027417 |
| SUPERFAMILY | SSF54171 | DNA-binding domain | 1379 | 1436 | 3.33E-21 | IPR016177 |
| Gene3D | G3DSA:3.40.50.300 | - | 562 | 720 | 2.1E-28 | IPR027417 |
| Gene3D | G3DSA:1.20.5.4130 | - | 400 | 518 | 4.1E-13 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 107 | 1.4E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 125 | 321 | 2.6E-49 | - |
| Gene3D | G3DSA:3.30.730.10 | AP2/ERF domain | 1378 | 1438 | 3.8E-27 | IPR036955 |
| Gene3D | G3DSA:1.10.10.10 | - | 811 | 909 | 1.1E-12 | IPR036388 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 915 | 1290 | 2.4E-19 | IPR032675 |
| SMART | SM00380 | rav1_2 | 1379 | 1442 | 1.4E-36 | IPR001471 |
| SMART | SM00220 | serkin_6 | 31 | 316 | 9.8E-32 | IPR000719 |
| ProSiteProfiles | PS51032 | AP2/ERF domain profile. | 1379 | 1436 | 24.289177 | IPR001471 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 31 | 322 | 36.824028 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 37 | 59 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 168 | 180 | - | IPR008271 |
| PRINTS | PR00367 | Ethylene responsive element binding protein signature | 1402 | 1418 | 1.5E-8 | IPR001471 |
| PRINTS | PR00364 | Disease resistance protein signature | 596 | 611 | 6.7E-13 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 668 | 682 | 6.7E-13 | - |
| PRINTS | PR00367 | Ethylene responsive element binding protein signature | 1380 | 1391 | 1.5E-8 | IPR001471 |
| PRINTS | PR00364 | Disease resistance protein signature | 765 | 779 | 6.7E-13 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1523 | 1542 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1445 | 1465 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23240.2 | - | 0 |
| RefSeq | XP_051189398.1 | disease resistance protein RGA5-like [Lolium perenne] | 0 |
| Q2R8L1 | Disease resistance protein RGA5 OS=Oryza sativa subsp. japonica OX=39947 GN=RGA5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6LRX8 | AP2/ERF domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology