Basic Information
Locus ID:
gene-QYE76_006892
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
catalytic domain of ctd-like phosphatases
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 227250509 | 227254097 | - | gene-QYE76_006892 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.16 | 55,211.85 Da | 56.20 | 90.36 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03031 | NLI interacting factor-like phosphatase | 305 | 414 | 1.0E-5 | IPR004274 |
| SUPERFAMILY | SSF56784 | HAD-like | 181 | 419 | 1.55E-16 | IPR036412 |
| Gene3D | G3DSA:3.40.50.1000 | - | 182 | 469 | 2.0E-27 | IPR023214 |
| SMART | SM00577 | forpap2 | 254 | 426 | 1.3E-4 | IPR004274 |
| ProSiteProfiles | PS50969 | FCP1 homology domain profile. | 187 | 442 | 13.795206 | IPR004274 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 49 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 52 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01270.1 | carboxyl-terminal domain (ctd) phosphatase-like 2. Encodes CPL2, a carboxyl-terminal domain (CTD) phosphatase that dephosphorylates CTD Ser5-PO4 of the RNA polymerase II complex. Regulates plant growth, stress and auxin responses. | 0 |
| RefSeq | XP_051184240.1 | RNA polymerase II C-terminal domain phosphatase-like 2 [Lolium perenne] | 0 |
| Q5YDB5 | RNA polymerase II C-terminal domain phosphatase-like 2 OS=Arabidopsis thaliana OX=3702 GN=CPL2 PE=1 SV=3 | 0 | |
| TrEMBL | R7WDM0 | protein-serine/threonine phosphatase OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology