Basic Information
Locus ID:
gene-QYE76_006873
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 226726779 | 226732297 | + | gene-QYE76_006873 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.04 | 72,884.99 Da | 57.22 | 69.17 | -0.87 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16647 | mRING-HC-C3HC5_NEU1 | 595 | 635 | 1.6829E-21 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 593 | 640 | 5.5E-12 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 595 | 641 | 3.38E-8 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 574 | 647 | 3.6E-14 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 596 | 635 | 10.807436 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 268 | 291 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 37 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 176 | 194 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 363 | 383 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 289 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 363 | 379 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 176 | 210 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G04460.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_047050058.1 | uncharacterized protein LOC124655150 isoform X1 [Lolium rigidum] | 0 |
| TrEMBL | F2EI58 | Predicted protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology