Basic Information
Locus ID:
gene-QYE76_006613
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Short Name:
CPK24
Description:
EF hand
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 218339563 | 218340558 | + | gene-QYE76_006613 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.05 | 36,831.10 Da | 66.63 | 77.86 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 78 | 286 | 2.96639E-98 | - |
| Pfam | PF00069 | Protein kinase domain | 81 | 285 | 2.5E-53 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 76 | 313 | 6.47E-64 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 170 | 318 | 4.1E-40 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 81 | 169 | 9.7E-23 | - |
| SMART | SM00220 | serkin_6 | 79 | 305 | 1.1E-55 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 79 | 331 | 37.120842 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 85 | 108 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 204 | 216 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 62 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57530.2 | - | 0 |
| RefSeq | XP_047047093.1 | calcium-dependent protein kinase 22-like [Lolium rigidum] | 0 |
| Q69IM9 | Calcium-dependent protein kinase 22 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK22 PE=3 SV=1 | 0 | |
| TrEMBL | A0A453LAZ9 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg58837 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00012123 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000004710, gene:ENSEOMG00000007423 ... |
| Apiaceae | Apium graveolens | 1 | Ag1G00766 |
| Brassicaceae | Brassica nigra | 1 | BniS02554g190.2N |
| Plantaginaceae | Plantago ovata | 1 | Pov_00036522 |
| Poaceae | Echinochloa crus-galli | 2 | BH07.84, Contig80_1.3 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_006613 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0600906 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr18G009170, Chr18G009200 |
| Poaceae | Zea mays | 1 | Zm00001eb351760_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-47862 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc07g08160 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_6_RagTag.1077 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-18439 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-5700 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-798 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132606690 |
| Zosteraceae | Zostera marina | 2 | Zosma03g11280.v3.1, Zosma06g15170.v3.1 |