Basic Information
Locus ID:
gene-QYE76_006527
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Transposase family tnp2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 215963346 | 215966775 | + | gene-QYE76_006527 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 50,229.98 Da | 41.40 | 70.02 | -0.83 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02992 | Transposase family tnp2 | 125 | 193 | 6.3E-31 | IPR004242 |
| Pfam | PF13952 | Domain of unknown function (DUF4216) | 242 | 318 | 3.0E-21 | IPR025312 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 413 | 428 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 343 | 357 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 388 | 428 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 343 | 366 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051202323.1 | uncharacterized protein LOC127315924 [Lolium perenne] | 0 |
| TrEMBL | B8BG15 | DUF4216 domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_32953 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | AH01.2693, CH05.4449 |
| Poaceae | Lolium multiflorum | 24 | gene-QYE76_004977, gene-QYE76_006303, gene-QYE76_006527 ... |