Basic Information
Locus ID:
gene-QYE76_006443
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Prokaryotic RING finger family 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 213469754 | 213470338 | + | gene-QYE76_006443 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.17 | 20,689.11 Da | 57.04 | 68.56 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16449 | RING-HC | 146 | 183 | 1.25044E-8 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 145 | 190 | 1.6E-12 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 145 | 190 | 4.24E-14 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 121 | 194 | 5.1E-15 | IPR013083 |
| SMART | SM00184 | ring_2 | 146 | 183 | 8.0E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 146 | 184 | 12.017182 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 161 | 170 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 69 | 85 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 54 | 68 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 32 | 94 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25030.3 | - | 0 |
| RefSeq | XP_051184141.1 | uncharacterized protein LOC127298284 [Lolium perenne] | 0 |
| TrEMBL | A0A453L7P0 | RING-type domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology