HalophFGD

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Basic Information
Locus ID: gene-QYE76_006364
Species & Taxonomic ID: Lolium multiflorum & 4521
Genome Assembly: GCA_030979885.1
Description: F-box-like
Maps and Mapping Data
Chromosome Start End Strand ID
chr5 211711150 211712472 + gene-QYE76_006364
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
7.23 50,424.97 Da 42.35 82.84 -0.43
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF08268 F-box associated domain 221 318 2.4E-7 IPR013187
Pfam PF00646 F-box domain 18 57 1.4E-9 IPR001810
SUPERFAMILY SSF81383 F-box domain 16 69 3.53E-14 IPR036047
Gene3D G3DSA:1.20.1280.50 - 2 97 2.3E-10 -
SMART SM00256 fbox_2 21 61 2.1E-6 IPR001810
TIGRFAM TIGR01640 F_box_assoc_1: F-box protein interaction domain 111 323 3.3E-25 IPR017451
ProSiteProfiles PS50181 F-box domain profile. 15 62 10.239312 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT2G43440.1 F-box and associated interaction domains-containing protein. 0
RefSeq XP_047048147.1 F-box protein At3g07870-like isoform X1 [Lolium rigidum] 0
Swiss-Prot A8MS20 F-box protein At2g43440 OS=Arabidopsis thaliana OX=3702 GN=At2g43440 PE=2 SV=1 0
TrEMBL A0A453L2H9 F-box domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 7 AH03.2319, AH06.87, BH03.2454, CH03.2648, CH03.2649, CH06.82 ...
CH03.2651
Poaceae Eleusine coracana subsp. coracana 7 gene-QOZ80_6AG0533780, gene-QOZ80_6AG0538870 ...
gene-QOZ80_6AG0538880, gene-QOZ80_6AG0538890, gene-QOZ80_6BG0492150, gene-QOZ80_6BG0492160, gene-QOZ80_6BG0492210
Poaceae Hordeum vulgare 4 HORVU.MOREX.r3.2HG0195230.1.CDS1 ...
HORVU.MOREX.r3.5HG0477220.1.CDS1, HORVU.MOREX.r3.5HG0489060.1.CDS1, HORVU.MOREX.r3.5HG0489110.1
Poaceae Lolium multiflorum 13 gene-QYE76_003498, gene-QYE76_004274, gene-QYE76_004797 ...
gene-QYE76_005988, gene-QYE76_005991, gene-QYE76_005995, gene-QYE76_005996, gene-QYE76_006035, gene-QYE76_006036, gene-QYE76_006039, gene-QYE76_006364, gene-QYE76_006492, gene-QYE76_030931
Poaceae Oryza coarctata 4 Oco17G003620, Oco17G007470, Oco17G009530, Oco18G003640
Poaceae Oryza sativa 4 LOC_Os09g20650.1, LOC_Os09g30170.1, LOC_Os09g30180.1 ...
LOC_Os09g34200.1
Poaceae Paspalum vaginatum 2 gene-BS78_02G167800, gene-BS78_02G217500
Poaceae Puccinellia tenuiflora 9 Pt_Chr0701658, Pt_Chr0701661, Pt_Chr0701662, Pt_Chr0701663 ...
Pt_Chr0701693, Pt_Chr0701696, Pt_Chr0701697, Pt_Chr0701699, Pt_Chr0702428
Poaceae Sporobolus alterniflorus 13 Chr0G015190, Chr0G015200, Chr10G007830, Chr10G007840 ...
Chr10G007850, Chr10G011140, Chr11G011130, Chr11G011290, Chr14G015880, Chr14G015890, Chr21G012180, Chr21G014920, Chr21G014930
Poaceae Thinopyrum elongatum 7 Tel5E01G330000, Tel5E01G406100, Tel5E01G406200 ...
Tel5E01G406300, Tel5E01G406400, Tel5E01G406600, Tel5E01G414700
Poaceae Triticum dicoccoides 18 gene_TRIDC5AG031850, gene_TRIDC5AG039550 ...
gene_TRIDC5AG039570, gene_TRIDC5AG039600, gene_TRIDC5AG039610, gene_TRIDC5AG039620, gene_TRIDC5AG039650, gene_TRIDC5AG039660, gene_TRIDC5AG039670, gene_TRIDC5BG033480, gene_TRIDC5BG042010, gene_TRIDC5BG042020, gene_TRIDC5BG042040, gene_TRIDC5BG042050, gene_TRIDC5BG042070, gene_TRIDC5BG042080, gene_TRIDC5BG042120, gene_TRIDC5BG042130
Poaceae Triticum aestivum 33 TraesCS2B02G484400.1, TraesCS2D02G463300.1 ...
TraesCS5A02G188400.1.cds1, TraesCS5A02G253800.1.cds1, TraesCS5A02G253900.2, TraesCS5A02G254000.1, TraesCS5A02G254100.1, TraesCS5A02G254200.2, TraesCS5A02G254300.1, TraesCS5A02G254400.1, TraesCS5A02G254500.1, TraesCS5B02G195200.1.cds1, TraesCS5B02G252700.1.cds1, TraesCS5B02G252800.2, TraesCS5B02G252900.3, TraesCS5B02G253000.1, TraesCS5B02G253100.1, TraesCS5B02G253200.3, TraesCS5B02G253300.3, TraesCS5B02G253400.1, TraesCS5B02G253500.2, TraesCS5B02G253600.1, TraesCS5D02G202600.1.cds1, TraesCS5D02G261400.1.cds1, TraesCS5D02G261500.1, TraesCS5D02G261600.4, TraesCS5D02G261700.1, TraesCS5D02G261800.1, TraesCS5D02G261900.3, TraesCS5D02G262000.1.cds1, TraesCS5D02G262100.2, TraesCS5D02G262200.1, TraesCS5D02G262300.1
Poaceae Zea mays 2 Zm00001eb101520_P001, Zm00001eb311420_P001
Poaceae Zoysia japonica 4 nbis-gene-19550, nbis-gene-19552, nbis-gene-19553 ...
nbis-gene-30501
Poaceae Zoysia macrostachya 5 Zma_g30238, Zma_g30509, Zma_g32489, Zma_g32745, Zma_g32746
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.