Basic Information
Locus ID:
gene-QYE76_005995
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
F-box associated domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 199730796 | 199736844 | + | gene-QYE76_005995 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.55 | 111,202.34 Da | 44.41 | 83.75 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 438 | 478 | 1.9E-8 | IPR001810 |
| Pfam | PF08268 | F-box associated domain | 641 | 735 | 1.1E-9 | IPR013187 |
| Pfam | PF00646 | F-box domain | 14 | 54 | 6.7E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 436 | 494 | 5.89E-15 | IPR036047 |
| SUPERFAMILY | SSF50965 | Galactose oxidase, central domain | 126 | 322 | 5.62E-6 | IPR011043 |
| SUPERFAMILY | SSF81383 | F-box domain | 14 | 70 | 1.22E-9 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 431 | 480 | 6.2E-10 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 9 | 55 | 1.7E-6 | - |
| SMART | SM00256 | fbox_2 | 18 | 58 | 7.3E-4 | IPR001810 |
| SMART | SM00256 | fbox_2 | 441 | 481 | 1.7E-5 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 532 | 748 | 2.5E-27 | IPR017451 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 112 | 339 | 6.0E-24 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 435 | 485 | 10.10684 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G07870.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_051188276.1 | F-box protein At3g07870-like isoform X1 [Lolium perenne] | 0 |
| Q9SFC7 | F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1 | 0 | |
| TrEMBL | N1QQP6 | Uncharacterized protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology