Basic Information
Locus ID:
gene-QYE76_005775
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Ubiquitin carboxyl-terminal hydrolase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 191957891 | 191976733 | + | gene-QYE76_005775 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.48 | 97,061.17 Da | 60.20 | 66.03 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02661 | Peptidase_C19E | 413 | 715 | 2.31578E-131 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 412 | 714 | 6.9E-45 | IPR001394 |
| Pfam | PF01753 | MYND finger | 123 | 160 | 2.3E-7 | IPR002893 |
| SUPERFAMILY | SSF144232 | HIT/MYND zinc finger-like | 120 | 162 | 1.22E-9 | - |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 408 | 720 | 1.51E-83 | IPR038765 |
| Gene3D | G3DSA:6.10.140.2220 | - | 113 | 165 | 2.0E-10 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 405 | 728 | 2.6E-90 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 412 | 717 | 50.961067 | IPR028889 |
| ProSiteProfiles | PS50865 | Zinc finger MYND-type profile. | 123 | 160 | 11.412541 | IPR002893 |
| ProSitePatterns | PS01360 | Zinc finger MYND-type signature. | 123 | 160 | - | IPR002893 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 413 | 428 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 856 | 870 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 796 | 822 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 88 | 102 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 276 | 317 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 84 | 107 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 743 | 758 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 851 | 876 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 725 | 758 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 317 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65450.1 | ubiquitin-specific protease 17. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_051188163.1 | ubiquitin carboxyl-terminal hydrolase 17-like isoform X1 [Lolium perenne] | 0 |
| Q9FKP5 | Ubiquitin carboxyl-terminal hydrolase 17 OS=Arabidopsis thaliana OX=3702 GN=UBP17 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2K2CRW5 | Ubiquitin carboxyl-terminal hydrolase 17 OS=Brachypodium distachyon OX=15368 GN=100834738 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology